Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015807438.1_cds_XP_016494842.1_9220
CDS Infomation

[gene=LOC107814028] [db_xref=GeneID:107814028] [protein=F-box protein At5g03100-like] [protein_id=XP_016494842.1] [location=join(14396..15292,15782..15952,17578..17880)] [gbkey=CDS]
Sequence

ATGGCTGATTCTAAGAGAGGAGATCGAGACCGACTCAGTAATTTGCCCGACGAAATTCTA
ATCCACATCCTCTCTATGTTGCCGAAAAGTAAAGCAGTTGTGAGAACGAGTGTATTATCT
AAACGATGGCAGTTTATGTGGAAATCAGTTCCAGTATCACTCTATTTTGTCCTCCCTGGG
CATGACGAAAAGAAGGCTACTGATTTCGTGGTTTCTACCCATAGGGAGCTTCATTATTGG
AGGTATTGCCGGAAAATCCGAAAACTCGAGGTCATTTTCAGTTTCGGCATTGAGGATTTT
GCTAAAGATGTTGATTTTTGGGTACATTTTGCGACTAAAATTGCTAATGTTGAAGATTTT
AAACTTGAATATTGCTTAGGATATGAATTGCCTCAAATTGCATATAAGAATACCTCTTTG
AAGAAATTGGGTATACAATACTGCACATTGAACCCTAGTGGTAGTGTGAACTGGAGTAGT
CTACTTTCTCTTTCATTTGGGAATGTGGAATTGAAGGACGATGCCATGGAAAAAGTATTA
TTAGGTTGCCCTGACTTGGAGTGCTTGGAATTGGATGATGTTGAGGGCATTCATCCTTTG
GAAATCAGCAATTTGAAGCTGAGAAAGTTAATCATAAAAAACTGCGAAAATGAGGAAAGT
GTCCCTTGGCTCGAAATATTAGCCCCAAATGTTCAAAATTTGCAACTTCTGGGGGTGTGC
GGTGAGATACGCTTGCGGCAGAGCAATGTGGATTCACTTGTCACTGCAGTCCTTGATTTA
AAGATCGAATTTGGAGAAGGAGTCATACCGGAGGAGAAGGCATATAGCTGTTTGAAGAAA
CTTCTTCACAGCGTTGCTCATGTCGAGAATCTTGAATTAGGTCCCTGGTGCATCGAGTGC
CTGTCCATACTGGAGTTGAAAGGGTGGAAGTCTCCACCATCAAGCCGGAAATTCTTAAAA
CTTGATGCAGCCTTAGAACAGTTGGACTTACCTGGAGTTTGCAGCTTTCTACAGAGTTCA
TTGGATCTTGAGACATTGGTCATTGACTGGTACAATCAGAAAGGAAGATATCATCTGTTG
AAGTACCCAAATGAGGATGAACTAAATAGGAGGTTTGAGACGCATAATTTTAACTCCTCA
TTGCTACATCTGAAGACCATCAAGATCAACTTTTATGGACCACTAAGTGAAAATAGGTCT
GTACAGCCATTGGTGAAATATTTGCTCAAGCATGCAATCGTGCTAGAAAAGTTCGTCATT
GCTGCCAGATACAGAGGGAGTGAAGTGTCTCGGGATTATGTTAATATGGAACAGGAGTTC
CTAAGCTTTCCAAGATCCTCTCCACATGCTTCAATTGTCTTTTCGTACTGA

Peptide Sequence

PEP ID

XP_016494842.1
PEP Infomation

PREDICTED: F-box protein At5g03100-like [Nicotiana tabacum]
Sequence

MADSKRGDRDRLSNLPDEILIHILSMLPKSKAVVRTSVLSKRWQFMWKSVPVSLYFVLPG
HDEKKATDFVVSTHRELHYWRYCRKIRKLEVIFSFGIEDFAKDVDFWVHFATKIANVEDF
KLEYCLGYELPQIAYKNTSLKKLGIQYCTLNPSGSVNWSSLLSLSFGNVELKDDAMEKVL
LGCPDLECLELDDVEGIHPLEISNLKLRKLIIKNCENEESVPWLEILAPNVQNLQLLGVC
GEIRLRQSNVDSLVTAVLDLKIEFGEGVIPEEKAYSCLKKLLHSVAHVENLELGPWCIEC
LSILELKGWKSPPSSRKFLKLDAALEQLDLPGVCSFLQSSLDLETLVIDWYNQKGRYHLL
KYPNEDELNRRFETHNFNSSLLHLKTIKINFYGPLSENRSVQPLVKYLLKHAIVLEKFVI
AARYRGSEVSRDYVNMEQEFLSFPRSSPHASIVFSY

Transcript Sequence

Gene sequence data has not been registered.